Like the Sonic comic, Knuckles's comic is filled with background information about Knuckles's family history. Knuckles's family had split into two factions: the Brotherhood of Guardians and the Dark Legion. Knuckles is a member of the former, and Julie-Su used to be a member of the latter. Much of the conflict of the comic surrounds the relations between these two warring factions.

• Issue #32
• Issue #31
• Issue #30
• Issue #29
• Issue #28
• Issue #27
• Issue #26
• Issue #25
• Issue #24
• Issue #23
• Issue #22
• Issue #21
• Issue #20
• Issue #19
• Issue #18
• Issue #17
• Issue #16
• Issue #15
• Issue #14
• Issue #13
• Issue #12
• Issue #11
• Issue #10
• Issue #9
• Issue #8
• Issue #7
• Issue #6
• Issue #5
• Issue #4
• Issue #3
• Issue #2
• Issue #1